ImageJ

ImageJ is a public domain Java image processing program inspired by NIH Image for the Macintosh. It can display, edit, analyze, process, save and print 8-bit, 16-bit and 32-bit images. It can read many image formats including TIFF, GIF, JPEG, BMP, DICOM, FITS and "raw". It supports "stacks", a series of images that share a single window. It is multithreaded, so time-consuming operations such as image file reading can be performed in parallel with other operations. ImageJ was designed with an open architecture that provides extensibility via Java plugins. Custom acquisition, analysis and processing plugins can be developed using ImageJ's built in editor and Java compiler. User-written plugins make it possible to solve almost any image processing or analysis problem.

Nikon Elements

This elements viewer is a free standalone program to view image files and datasets. Full versions of the software are available by talking to OPTIMA staff

Nikon EZ-C1

EZ-C1 FreeViewer is a free software allowing users to look at data acquired on the Nikon Confocal system.

Volocity (Perkin-Elmer)

Volocity® provides all the tools you need to visualize, analyze and validate 3D fluorescence images from a wide range of confocal microscopy, widefield and high content screening systems and is fully integrated for a seamless user experience.

Scientific Volume Imaging

SVI is a wealth of information about deconvolution – acquisition and image processing.

Bitplane

Bitplane's Imaris software provides advanced tools for visualization, segmentation and interpretation of 3D and 4D microscopic datasets.

Visiopharm

Visiopharm is a good resource for deployed or cloud based stereology and image analysis.

• Software

  • ImageJ

  • Nikon Elements

  • Nikon EZ-C1

  • Volocity

  • SVI

  • Bitplane

  • Visiopharm

  Web Info

  • Web Info

  Tips

  • Tips

  FAQs

  • FAQs